After looking at the pictures of your jackshaft some more, what I was going to suggest probably won't work for you.
Many years ago I had a high speed vibration problem near the left footwell. It turned out there was a minor imperfection on the bearing area of the jackshaft.
I flipped the bearing carrier around backwards. This moved the bearing about 1/2 inch further onto the shaft. The bearing collar now faces outward. This moving the bearing in to a perfect surface completely solved the vibration problem.
I would agree with anyone that this increases the forces on the bearing....slightly.
The perfect fix would be to have the jackshaft remachined by a competent shop...but I have put thousands of miles on my Invader with the setup in the picture.
I'm afraid your jackshaft may be too far gone....even if you reverse the carrier and get the bearing to some undamaged part of the shaft, the locking collar would then be over the badly damaged part of your jackshaft.
Only 2 other options I see.
Replace the shaft....I don't always trust what one might get from eBay or a salvage yard. You might get a pile of junk.
Perhaps someone on this site has one they would sell.
Or, yank the shaft and take it to a good machine shop that could build it up and turn it down to be like new.